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HistoAtlas

Blog

Educational articles on computational pathology, genomics, and cancer biology.

Heatmap of EMT pathway correlations with histomic features across 12 TCGA cancer types from HistoAtlas

Epithelial-Mesenchymal Transition in Cancer

Epithelial-mesenchymal transition reshapes tumor morphology across 12 cancer types — quantified from 6,745 TCGA slides. Pan-cancer data from HistoAtlas.

· epithelial mesenchymal transition
Bar chart showing correlations between MYC copy number and tumor morphology features in breast cancer

Copy Number Variation in Cancer: From DNA to Morphology

How copy number variation drives cancer via gene amplification and deletion — with CNV-morphology correlations across 9,000+ TCGA samples on HistoAtlas.

· copy number variation
Bar chart showing mutation-driven morphological changes across cancer types from HistoAtlas

Tumor Mutational Burden: What It Means for Cancer Morphology

Explore how tumor mutational burden reshapes tumor morphology and immune infiltration across 21 cancer types — exclusive pan-cancer data from HistoAtlas.

· tumor mutational burden
Heatmap of pathway enrichment scores across 10 morphological clusters from HistoAtlas

Gene Set Enrichment Analysis: A Visual Guide

Learn how gene set enrichment analysis (GSEA) identifies active pathways in cancer. Explore pathway enrichment across morphological clusters on HistoAtlas.

· gene set enrichment analysis